Genetics
Research in the Genetics Research Program involves projects on several rare genetic disorders and on genetic and life style risk factors in diabetes and diabetic complications.
Molecular Genetics
Original Articles
Haavisto A, Klenberg L, Tommiska V, Lano A, Mikkola K, Fellman V; Finnish ELBW Cohort Study Group (FinELBW).BMJ Paediatr Open. 2022 Apr;6(1):e001361. doi: 10.1136/bmjpo-2021-001361.PMID: 36053586
SkewC: Identifying cells with skewed gene body coverage in single-cell RNA sequencing data.
Abugessaisa I, Hasegawa A, Noguchi S, Cardon M, Watanabe K, Takahashi M, Suzuki H, Katayama S, Kere J, Kasukawa T. iScience. 2022 Jan 15;25(2):103777. doi: 10.1016/j.isci.2022.103777. eCollection 2022 Feb 18. PMID: 35146392 Free PMC article.
Deep sequencing of short capped RNAs reveals novel families of noncoding RNAs.
de Hoon M, Bonetti A, Plessy C, Ando Y, Hon CC, Ishizu Y, Itoh M, Kato S, Lin D, Maekawa S, Murata M, Nishiyori H, Shin JW, Stolte J, Suzuki AM, Tagami M, Takahashi H, Thongjuea S, Forrest ARR, Hayashizaki Y, Kere J, Carninci P. Genome Res. 2022 Aug 12;32(9):1727-35. doi: 10.1101/gr.276647.122. Online ahead of print. PMID: 35961773 Free PMC article.
Dijkstra DJ, Lokki AI, Gierman LM, Borggreven NV, van der Keur C, Eikmans M, Gelderman KA, Laivuori H; FINNPEC Core Investigator Group (including Kere J); Iversen AC, van der Hoorn MP, Trouw LA. Front Immunol. 2022 Mar 31;13:842451 doi: 10.3389/fimmu.2022.842451. eCollection 2022. PMID: 35432365 Free PMC article.
Discovery of 42 genome-wide significant loci associated with dyslexia.
Doust C, Fontanillas P, Eising E, Gordon SD, Wang Z, Alagöz G, Molz B; 23andMe Research Team; Quantitative Trait Working Group of the GenLang Consortium (including Kere J); Pourcain BS, Francks C, Marioni RE, Zhao J, Paracchini S, Talcott JB, Monaco AP, Stein JF, Gruen JR, Olson RK, Willcutt EG, DeFries JC, Pennington BF, Smith SD, Wright MJ, Martin NG, Auton A, Bates TC, Fisher SE, Luciano M.Nat Genet. 2022 Nov;54(11):1621-1629. doi: 10.1038/s41588-022-01192-y. Epub 2022 Oct 20.PMID: 36266505 Free PMC article.
Eising E, Mirza-Schreiber N, de Zeeuw EL, Wang CA, Truong DT, Allegrini AG, Shapland CY, Zhu G, Wigg KG, Gerritse ML, Molz B, Alagöz G, Gialluisi A, Abbondanza F, Rimfeld K, van Donkelaar M, Liao Z, Jansen PR, Andlauer TFM, Bates TC, Bernard M, Blokland K, Bonte M, Børglum AD, Bourgeron T, Brandeis D, Ceroni F, Csépe V, Dale PS, de Jong PF, DeFries JC, Démonet JF, Demontis D, Feng Y, Gordon SD, Guger SL, Hayiou-Thomas ME, Hernández-Cabrera JA, Hottenga JJ, Hulme C, Kere J, Kerr EN, Koomar T, Landerl K, Leonard GT, Lovett MW, Lyytinen H, Martin NG, Martinelli A, Maurer U, Michaelson JJ, Moll K, Monaco AP, Morgan AT, Nöthen MM, Pausova Z, Pennell CE, Pennington BF, Price KM, Rajagopal VM, Ramus F, Richer L, Simpson NH, Smith SD, Snowling MJ, Stein J, Strug LJ, Talcott JB, Tiemeier H, van der Schroeff MP, Verhoef E, Watkins KE, Wilkinson M, Wright MJ, Barr CL, Boomsma DI, Carreiras M, Franken MJ, Gruen JR, Luciano M, Müller-Myhsok B, Newbury DF, Olson RK, Paracchini S, Paus T, Plomin R, Reilly S, Schulte-Körne G, Tomblin JB, van Bergen E, Whitehouse AJO, Willcutt EG, St Pourcain B, Francks C, Fisher SE. Proc Natl Acad Sci U S A. 2022 Aug 30;119(35):e2202764119. doi: 10.1073/pnas.2202764119. Epub 2022 Aug 23. PMID: 35998220 Free PMC article.
Karvonen V, Harjama L, Heliö K, Kettunen K, Elomaa O, Koskenvuo JW, Kere J, Weckström S, Holmström M, Saarela J, Ranki A, Heliö T, Hannula-Jouppi K. J Eur Acad Dermatol Venereol. 2022 Aug;36(8):1349-1358. doi: 10.1111/jdv.18164. Epub 2022 May 6.PMID: 35445468 Free PMC article.
Koel M, Krjutškov K, Saare M, Samuel K, Lubenets D, Katayama S, Einarsdottir E, Vargas E, Sola-Leyva A, Lalitkumar PG, Gemzell-Danielsson K, Blesa D, Simon C, Lanner F, Kere J, Salumets A, Altmäe S. Hum Reprod Open. 2022 Oct 13;2022(4):hoac043. doi: 10.1093/hropen/hoac043. eCollection 2022.PMID: 36339249 Free PMC article.
Oláh P, Szlávicz E, Kuchner M, Nemmer J, Zeeuwen P, Lefèvre-Utile A, Fyhrquist N, Prast-Nielsen S, Skoog T, Serra A, Rodríguez E, Raap U, Meller S, Gyulai R, Hupé P, Kere J, Levi-Schaffer F, Tsoka S, Alexander H, Nestle FO, Schröder JM, Weidinger S, van den Bogaard E, Soumelis V, Greco D, Barker J, Lauerma A, Ranki A, Andersson B, Alenius H, Homey B.
J Dermatol Sci. 2022 Jun;106(3):132-140. doi: 10.1016/j.jdermsci.2022.04.007. Epub 2022 Apr 15.
PMID: 35537882
Price KM, Wigg KG, Eising E, Feng Y, Blokland K, Wilkinson M, Kerr EN, Guger SL; Quantitative Trait Working Group of the GenLang Consortium (including Kere J); Fisher SE, Lovett MW, Strug LJ, Barr CL.Transl Psychiatry. 2022 Nov 29;12(1):495. doi: 10.1038/s41398-022-02250-z.
PMID: 36446759 Free PMC article.
CRISPR activation enables high-fidelity reprogramming into human pluripotent stem cells.
Sokka J, Yoshihara M, Kvist J, Laiho L, Warren A, Stadelmann C, Jouhilahti EM, Kilpinen H, Balboa D, Katayama S, Kyttälä A, Kere J, Otonkoski T, Weltner J, Trokovic R. Stem Cell Reports. 2022 Feb 8;17(2):413-426. doi: 10.1016/j.stemcr.2021.12.017. Epub 2022 Jan 20.PMID: 35063129 Free PMC article.
Tuovinen EA, Kuismin O, Soikkonen L, Martelius T, Kaustio M, Hämäläinen S, Viskari H, Syrjänen J, Wartiovaara-Kautto U, Eklund KK, Saarela J, Varjosalo M, Kere J, Hautala T, Seppänen MRJ. Clin Immunol. 2023 Jan;246:109181. doi: 10.1016/j.clim.2022.109181. Epub 2022 Nov 8.PMID: 36356849
Tuovinen EA, Pöysti S, Hamdan F, Le KM, Keskitalo S, Turunen T, Minier L, Mamia N, Heiskanen K, Varjosalo M, Cerullo V, Kere J, Seppänen MRJ, Hänninen A, Grönholm J.J Clin Immunol. 2022 Oct 19. doi: 10.1007/s10875-022-01375-6. Online ahead of print.PMID: 36260239
Valta M, Yoshihara M, Einarsdottir E, Pahkuri S, Ezer S, Katayama S, Knip M, Veijola R, Toppari J, Ilonen J, Kere J, Lempainen J. Pediatr Diabetes. 2022 Sep;23(6):703-713. doi: 10.1111/pedi.13346. Epub 2022 Apr 25.PMID: 35419920 Free PMC article.
Filaggrin mutations in relation to skin barrier and atopic dermatitis in early infancy.
Hoyer A, Rehbinder EM, Färdig M, Asad S, Lødrup Carlsen KC, Endre KMA, Granum B, Haugen G, Hedlin G, Monceyron Jonassen C, Katayama S, Konradsen JR, Landrø L, LeBlanc M, Olsson Mägi CA, Rudi K, Skjerven HO, Staff AC, Vettukattil R, Bradley M, Nordlund B, Söderhäll C.Br J Dermatol. 2022 Mar;186(3):544-552. doi: 10.1111/bjd.20831. Epub 2021 Dec 22.PMID: 34698386
DUX4 is a multifunctional factor priming human embryonic genome activation.
Vuoristo S, Bhagat S, Hydén-Granskog C, Yoshihara M, Gawriyski L, Jouhilahti EM, Ranga V, Tamirat M, Huhtala M, Kirjanov I, Nykänen S, Krjutškov K, Damdimopoulos A, Weltner J, Hashimoto K, Recher G, Ezer S, Paluoja P, Paloviita P, Takegami Y, Kanemaru A, Lundin K, Airenne TT, Otonkoski T, Tapanainen JS, Kawaji H, Murakawa Y, Bürglin TR, Varjosalo M, Johnson MS, Tuuri T, Katayama S, Kere J. iScience. 2022 Mar 22;25(4):104137. doi: 10.1016/j.isci.2022.104137. eCollection 2022 Apr 15.PMID: 35402882 Free PMC article.
Yoshihara M, Kirjanov I, Nykänen S, Sokka J, Weltner J, Lundin K, Gawriyski L, Jouhilahti EM, Varjosalo M, Tervaniemi MH, Otonkoski T, Trokovic R, Katayama S, Vuoristo S, Kere J.
Stem Cell Reports. 2022 Jul 12;17(7):1743-1756. doi: 10.1016/j.stemcr.2022.06.002. Epub 2022 Jun 30.PMID: 35777358 Free PMC article.
The continued absence of functional germline stem cells in adult ovaries.
Yoshihara M, Wagner M, Damdimopoulos A, Zhao C, Petropoulos S, Katayama S, Kere J, Lanner F, Damdimopoulou P. Stem Cells. 2022 Sep 25:sxac070. doi: 10.1093/stmcls/sxac070. Online ahead of print. PMID: 36153824
Lundin K, Sepponen K, Väyrynen P, Liu X, Yohannes DA, Survila M, Ghimire B, Känsäkoski J, Katayama S, Partanen J, Vuoristo S, Paloviita P, Rahman N, Raivio T, Luiro K, Huhtaniemi I, Varjosalo M, Tuuri T, Tapanainen JS.Mol Hum Reprod. 2022 Apr 29;28(5):gaac012. doi: 10.1093/molehr/gaac012.PMID: 35471239
Nuutila K, Katayama S, Laitinen A, Siltanen A, Patrikoski M, Valtonen J, Kankainen M, Kerkelä E, Kaartinen T, Juteau S, Korhonen M, Vuola J, Kankuri E.Burns. 2022 Sep 16:S0305-4179(22)00240-6. doi: 10.1016/j.burns.2022.09.006. Online ahead of print.PMID: 36195485
Daura E, Tegelberg S, Hakala P, Lehesjoki AE, Joensuu T. Front Mol Neurosci. 2022 Nov 30;15:1069122. doi: 10.3389/fnmol.2022.1069122.
Koko M, Motelow JE, Stanley KE, Bobbili DR, Dhindsa RS, May P; Canadian Epilepsy Network; Epi4K Consortium; Epilepsy Phenome/Genome Project; EpiPGX Consortium; EuroEPINOMICS-CoGIE Consortium (including Lehesjoki AE). Epilepsia. 2022 Mar;63(3):723-735. doi: 10.1111/epi.17166.
van der Knoop MM, Maroofian R, Fukata Y, van Ierland Y, Karimiani EG, Lehesjoki AE, Muona M, Paetau A, Miyazaki Y, Hirano Y, Selim L, de França M, Fock RA, Beetz C, Ruivenkamp CAL, Eaton AJ, Morneau-Jacob FD, Sagi-Dain L, Shemer-Meiri L, Peleg A, Haddad-Halloun J, Kamphuis DJ, Peeters-Scholte CMPCD, Kurul SH, Horvath R, Lochmüller H, Murphy D, Waldmüller S, Spranger S, Overberg D, Muir AM, Rad A, Vona B, Abdulwahad F, Maddirevula S, Povolotskaya IS, Voinova VY, Gowda VK, Srinivasan VM, Alkuraya FS, Mefford HC, Alfadhel M, Haack TB, Striano P, Severino M, Fukata M, Hilhorst-Hofstee Y, Houlden H.Brain. 2022 Jul 29;145(7):2301-2312. doi: 10.1093/brain/awac116
NCOR2 is a novel candidate gene for migraine-epilepsy phenotype.
Nuottamo ME, Häppölä P, Artto V, Hautakangas H, Pirinen M, Hiekkalinna T, Ellonen P, Lepistö M, Hämäläinen E; International Headache Genetics Consortium (IHGC), FinnGenConsortium; Siren A, Lehesjoki AE, Kallela M, Palotie A, Kaunisto MA, Wessman M.Cephalalgia. 2022 Jun;42(7):631-644. doi: 10.1177/03331024211068065.
Hautakangas H, Winsvold BS, Ruotsalainen SE, Bjornsdottir G, Harder AVE, Kogelman LJA, Thomas LF, Noordam R, Benner C, Gormley P, Artto V, Banasik K, Bjornsdottir A, Boomsma DI, Brumpton BM, Burgdorf KS, Buring JE, Chalmer MA, de Boer I, Dichgans M, Erikstrup C, Färkkilä M, Garbrielsen ME, Ghanbari M, Hagen K, Häppölä P, Hottenga JJ, Hrafnsdottir MG, Hveem K, Johnsen MB, Kähönen M, Kristoffersen ES, Kurth T, Lehtimäki T, Lighart L, Magnusson SH, Malik R, Pedersen OB, Pelzer N, Penninx BWJH, Ran C, Ridker PM, Rosendaal FR, Sigurdardottir GR, Skogholt AH, Sveinsson OA, Thorgeirsson TE, Ullum H, Vijfhuizen LS, Widén E, van Dijk KW; International Headache Genetics Consortium; HUNT All-in Headache; Danish Blood Donor Study Genomic Cohort; Aromaa A, Belin AC, Freilinger T, Ikram MA, Järvelin MR, Raitakari OT, Terwindt GM, Kallela M, Wessman M, Olesen J, Chasman DI, Nyholt DR, Stefánsson H, Stefansson K, van den Maagdenberg AMJM, Hansen TF, Ripatti S, Zwart JA, Palotie A, Pirinen M.Nat Genet. 2022 Feb;54(2):152-160. doi: 10.1038/s41588-021-00990-0. Epub 2022 Feb 3.PMID: 35115687 Free PMC article.
Polygenic risk provides biological validity for the ICHD-3 criteria among Finnish migraine families.
Häppölä P, Gormley P, Nuottamo ME, Artto V, Sumelahti ML, Nissilä M, Keski-Säntti P, Ilmavirta M, Kaunisto MA, Hämäläinen EI, Ripatti S, Pirinen M, Wessman M, Palotie A, Kallela M; International Headache Genetics Consortium (IHGC).Cephalalgia. 2022 Apr;42(4-5):345-356. doi: 10.1177/03331024211045651. Epub 2021 Oct 14.PMID: 34648375 Free PMC article.
Anderson H, Davison S, Lytle KM, Honkanen L, Freyer J, Mathlin J, Kyöstilä K, Inman L, Louviere A, Chodroff Foran R, Forman OP, Lohi H, Donner J. PLoS Genet. 2022 Jun 16;18(6):e1009804. doi: 10.1371/journal.pgen.1009804. eCollection 2022 Jun.
Berk BA, Ottka C, Hong Law T, Packer RMA, Wessmann A, Bathen-Nöthen A, Jokinen TS, Knebel A, Tipold A, Lohi H, Volk HA. Front Vet Sci. 2022 Oct 6;9:935430. doi: 10.3389/fvets.2022.935430. eCollection 2022.
Belanger JM, Heinonen T, Famula TR, Mandigers PJJ, Leegwater PA, Hytönen MK, Lohi H, Oberbauer AM. Genes (Basel). 2022 Jun 23;13(7):1124. doi: 10.3390/genes13071124.
Metabolomic serum abnormalities in dogs with hepatopathies.
Imbery CA, Dieterle F, Ottka C, Weber C, Schlotterbeck G, Müller E, Lohi H, Giger U. Sci Rep. 2022 Mar 29;12(1):5329. doi: 10.1038/s41598-022-09056-5. PMID: 35351920
Imbery CA, Dieterle F, Ottka C, Weber C, Schlotterbeck G, Müller E, Lohi H, Giger U. Metabolites. 2022 Apr 9;12(4):339. doi: 10.3390/metabo12040339.
Fearfulness associates with problematic behaviors and poor socialization in cats.
Mikkola S, Salonen M, Hakanen E, Lohi H. iScience. 2022 Oct 3;25(10):105265. doi: 10.1016/j.isci.2022.105265. eCollection 2022 Oct 21.
Aggressiveness, ADHD-like behaviour, and environment influence repetitive behaviour in dogs.
Sulkama S, Salonen M, Mikkola S, Hakanen E, Puurunen J, Araujo C, Lohi H. Sci Rep. 2022 Mar 24;12(1):3520. doi: 10.1038/s41598-022-07443-6. PMID: 35332179
Ottka C, Puurunen J, Müller E, Weber C, Klein R, Lohi H. Metabolomics. 2022 Jul 20;18(8):58. doi: 10.1007/s11306-022-01917-4.
Age, breed, sex and diet influence serum metabolite profiles of 2000 pet dogs.
Puurunen J, Ottka C, Salonen M, Niskanen JE, Lohi H. R Soc Open Sci. 2022 Feb 16;9(2):211642. doi: 10.1098/rsos.211642. eCollection 2022 Feb. PMID: 35223061
Personality traits associate with behavioral problems in pet dogs.
Salonen M, Mikkola S, Hakanen E, Sulkama S, Puurunen J, Lohi H. Transl Psychiatry. 2022 Feb 23;12(1):78. doi: 10.1038/s41398-022-01841-0.
Serum metabolomic profiles in dogs with chronic enteropathy.
Walker HK, Boag AM, Ottka C, Lohi H, Handel I, Gow AG, Mellanby RJ. J Vet Intern Med. 2022 Sep;36(5):1752-1759. doi: 10.1111/jvim.16419. Epub 2022 Jul 26.
Arponen H, Waltimo-Sirén J, Hauta-Alus HH, Tuhkiainen M, Sorsa T, Tervahartiala T, Andersson S, Mäkitie O, Holmlund-Suila E. Horm Res Paediatr. 2022 Dec 6. doi: 10.1159/000528536. Online ahead of print.PMID: 36473453
Recurrent Hypokalemia and Adrenal Steroids in Patients With APECED.
Borchers J, Mäkitie O, Jääskeläinen J, Laakso S. Front Endocrinol (Lausanne). 2022 Jun 22;13:904507. doi: 10.3389/fendo.2022.904507. eCollection 2022.PMID: 35813662
Hauta-Alus HH, Holmlund-Suila EM, Valkama SM, Enlund-Cerullo M, Rosendahl J, Coghlan RF, Andersson S, Mäkitie O.J Bone Miner Res. 2022 Sep;37(9):1653-1664. doi: 10.1002/jbmr.4650. Epub 2022 Aug 4.PMID: 35838180
Kukkola HL, Utriainen P, Huttunen P, Taskinen M, Mäkitie O, Vakkilainen S. Front Immunol. 2022 Sep 23;13:1004694. doi: 10.3389/fimmu.2022.1004694. eCollection 2022.PMID: 36211439
Laakso S, Holopainen E, Betterle C, Saari V, Vogt E, Schmitt MM, Winer KK, Kareva M, Sabbadin C, Husebye ES, Orlova E, Lionakis MS, Mäkitie O. J Clin Endocrinol Metab. 2022 Jan 18;107(2):e528-e537. doi: 10.1210/clinem/dgab705.PMID: 34570215
Laakso S, Kaijansinkko H, Räisänen-Sokolowski A, Jahnukainen T, Kataja J, Mäkitie O, Helanterä I, Jalanko H. Transplantation. 2022 Apr 1;106(4):e244-e246. doi: 10.1097/TP.0000000000003993. PMID: 34856597 No abstract available.
Lipocalin-2 is associated with FGF23 in WNT1 and PLS3 osteoporosis.
Loid P, Hauta-Alus H, Mäkitie O, Magnusson P, Mäkitie RE. Front Endocrinol (Lausanne). 2022 Sep 8;13:954730. doi: 10.3389/fendo.2022.954730. eCollection 2022.PMID: 36157448
Loid P, Lipsanen-Nyman M, Ala-Mello S, Hannula-Jouppi K, Kere J, Mäkitie O, Muurinen M. Front Pediatr. 2022 Oct 4;10:969881. doi: 10.3389/fped.2022.969881. eCollection 2022. PMID: 36268036
Mosaic Deletions of Known Genes Explain Skeletal Dysplasias With High and Low Bone Mass.
Muurinen M, Taylan F, Tournis S, Eisfeldt J, Balanika A, Vastardis H, Ala-Mello S, Mäkitie O, Costantini A. JBMR Plus. 2022 Jul 5;6(8):e10660. doi: 10.1002/jbm4.10660. eCollection 2022 Aug.PMID: 35991531
A Novel Osteochondrodysplasia With Empty Sella Associates With a TBX2 Variant.
Mäkitie RE, Toiviainen-Salo S, Kaitila I, Mäkitie O. Front Endocrinol (Lausanne). 2022 Mar 3;13:845889. doi: 10.3389/fendo.2022.845889. eCollection 2022.PMID: 35311234
A multi-omics study to characterize the transdifferentiation of human dermal fibroblasts to osteoblast-like cells. Pihlström S, Määttä K, Öhman T, Mäkitie RE, Aronen M, Varjosalo M, Mäkitie O, Pekkinen M. Front Mol Biosci. 2022 Nov 17;9:1032026. doi: 10.3389/fmolb.2022.1032026. eCollection 2022.PMID: 36465561
Reilly ML, Ain NU, Muurinen M, Tata A, Huber C, Simon M, Ishaq T, Shaw N, Rusanen S, Pekkinen M, Högler W, Knapen MFCM, van den Born M, Saunier S, Naz S, Cormier-Daire V, Benmerah A, Mäkitie O. J Bone Miner Res. 2022 Sep;37(9):1642-1652. doi: 10.1002/jbmr.4639. Epub 2022 Jul 19.PMID: 35748595
Bone mineral density in very low birthweight adults-A sibling study.
Sandboge S, Kuula J, Björkqvist J, Hovi P, Mäkitie O, Kajantie E. Paediatr Perinat Epidemiol. 2022 Sep;36(5):665-672. doi: 10.1111/ppe.12876. Epub 2022 Mar 25.PMID: 35333415
Mäkitie RE, Mäkitie S, Mäyränpää MK, Pekkinen M. Bone Rep. 2022 Mar 26;16:101525. doi: 10.1016/j.bonr.2022.101525. eCollection 2022 Jun.PMID: 35535173.
Eberl A, Qadri S, Saavalainen P, Sipponen T. Eur J Gastroenterol Hepatol. 2022 Nov 1;34(11):1125-1131. doi: 10.1097/MEG.0000000000002431. Epub 2022 Sep 10. PMID: 36170681
Johansson T, Partanen J, Saavalainen P. Front Immunol. 2022 Sep 28;13:1007425. doi: 10.3389/fimmu.2022.1007425. eCollection 2022. PMID: 36248878
Xu M, Leskinen K, Gritti T, Groma V, Arola J, Lepistö A, Sipponen T, Saavalainen P, Söderlund-Venermo M. Front Microbiol. 2022 May 24;13:914181. doi: 10.3389/fmicb.2022.914181. eCollection 2022. PMID: 35685923
The Effect of Antibiotics on the Infant Gut Fungal Microbiota.
Ventin-Holmberg R, Saqib S, Korpela K, Nikkonen A, Peltola V, Salonen A, de Vos WM, Kolho KL.J Fungi (Basel). 2022 Mar 22;8(4):328. doi: 10.3390/jof8040328.PMID: 35448562
Kawan S, Backlund MP, Immonen AT, Kivelä TT, Turunen JA.Br J Ophthalmol. 2022 Nov 16:bjophthalmol-2022-321825. doi: 10.1136/bjo-2022-321825. Online ahead of print.
Natural history and biomarkers of retinal dystrophy caused by the biallelic TULP1 variant c.148delG.
Majander A, Sankila EM, Falck A, Vasara LK, Seitsonen S, Kulmala M, Haavisto AK, Avela K, Turunen JA. Acta Ophthalmol. 2022 Sep 21. doi: 10.1111/aos.15252. Online ahead of print.
BAP1 germline variants in Finnish patients with malignant mesothelioma.
Repo P, Staskiewicz A, Sutinen E, Rönty M, Tero T Kivelä, Myllärniemi M, Turunen JA.Lung Cancer. 2022 Jan 24;165:102-107. doi: 10.1016/j.lungcan.2022.01.017. Online ahead of print.
Cabrera-Serrano M, Caccavelli L, Savarese M, Vihola A, Jokela M, Johari M, Capiod T, Madrange M, Bugiardini E, Brady S, Quinlivan R, Merve A, Scalco R, Hilton-Jones D, Houlden H, Aydin HI, Ceylaner S, Drewes S, Vockley J, Taylor RL, Folland C, Kelly A, Goullee H, Ylikallio E, Auranen M, Tyynismaa H, Udd B, Forrest ARR, Davis MR, Bratkovic D, Manton N, Robertson T, O'Gorman C, McCombe P, Laing NG, Phillips L, de Lonlay P, Ravenscroft G.Brain. 2022 Nov 21;145(11):3985-3998. doi: 10.1093/brain/awab484.PMID: 34957489
Adult-onset dominant muscular dystrophy in Greek families caused by Annexin A11.
Johari M, Papadimas G, Papadopoulos C, Xirou S, Kanavaki A, Chrysanthou-Piterou M, Rusanen S, Savarese M, Hackman P, Udd B. Ann Clin Transl Neurol. 2022 Oct;9(10):1660-1667. doi: 10.1002/acn3.51665. Epub 2022 Sep 22. PMID: 36134701
Johari M, Vihola A, Palmio J, Jokela M, Jonson PH, Sarparanta J, Huovinen S, Savarese M, Hackman P, Udd B. J Neurol. 2022 Aug;269(8):4161-4173. doi: 10.1007/s00415-022-11029-7. Epub 2022 Mar 2. PMID: 35237874
Onore ME, Savarese M, Picillo E, Passamano L, Nigro V, Politano L.Int J Mol Sci. 2022 Dec 14;23(24):15906. doi: 10.3390/ijms232415906.PMID: 36555543
Scapuloperoneal syndrome with mitochondrial DNA deletion.
Pichette É, O'Ferrall E, Karamchandani J, Savarese M, Udd B, Massie R.J Neurol Sci. 2022 Mar 15;434:120164. doi: 10.1016/j.jns.2022.120164. Epub 2022 Jan 29. PMID: 35121208 No abstract available.
Schiava M, Ikenaga C, Villar-Quiles RN, Caballero-Ávila M, Topf A, Nishino I, Kimonis V, Udd B, Schoser B, Zanoteli E, Souza PVS, Tasca G, Lloyd T, Lopez-de Munain A, Paradas C, Pegoraro E, Nadaj-Pakleza A, De Bleecker J, Badrising U, Alonso-Jiménez A, Kostera-Pruszczyk A, Miralles F, Shin JH, Bevilacqua JA, Olivé M, Vorgerd M, Kley R, Brady S, Williams T, Domínguez-González C, Papadimas GK, Warman-Chardon J, Claeys KG, de Visser M, Muelas N, LaForet P, Malfatti E, Alfano LN, Nair SS, Manousakis G, Kushlaf HA, Harms MB, Nance C, Ramos-Fransi A, Rodolico C, Hewamadduma C, Cetin H, García-García J, Pál E, Farrugia ME, Lamont PJ, Quinn C, Nedkova-Hristova V, Peric S, Luo S, Oldfors A, Taylor K, Ralston S, Stojkovic T, Weihl C, Diaz-Manera J; VCP International Study Group; VCP International Study Group.J Neurol Neurosurg Psychiatry. 2022 Jul 27:jnnp-2022-328921. doi: 10.1136/jnnp-2022-328921. Online ahead of print. PMID: 35896379
Nemaline Myopathy in Brazilian Patients: Molecular and Clinical Characterization.
Gurgel-Giannetti J, Souza LS, Yamamoto GL, Belisario M, Lazar M, Campos W, Pavanello RCM, Zatz M, Reed U, Zanoteli E, Oliveira AB, Lehtokari VL, Casella EB, Machado-Costa MC, Wallgren-Pettersson C, Laing NG, Nigro V, Vainzof M. Int J Mol Sci. 2022 Oct 9;23(19):11995. doi: 10.3390/ijms231911995. PMID: 36233295
Ranu N, Laitila J, Dugdale HF, Mariano J, Kolb JS, Wallgren-Pettersson C, Witting N, Vissing J, Vilchez JJ, Fiorillo C, Zanoteli E, Auranen M, Jokela M, Tasca G, Claeys KG, Voermans NC, Palmio J, Huovinen S, Moggio M, Beck TN, Kontrogianni-Konstantopoulos A, Granzier H, Ochala J. Acta Neuropathol Commun. 2022 Dec 17;10(1):185. doi: 10.1186/s40478-022-01491-9. PMID: 36528760
A custom ddPCR method for the detection of copy number variations in the nebulin triplicate region.
Sagath L, Lehtokari VL, Wallgren-Pettersson C, Pelin K, Kiiski K. PLoS One. 2022 May 16;17(5):e0267793. doi: 10.1371/journal.pone.0267793. eCollection 2022. PMID: 35576196
Sagath L, Lehtokari VL, Pelin K, Kiiski K. Genes (Basel). 2022 May 19;13(5):905. doi: 10.3390/genes13050905. PMID: 35627290
Respiratory muscle function in patients with nemaline myopathy.
van Kleef ESB, van Doorn JLM, Gaytant MA, de Weerd W, Vosse BAH, Wallgren-Pettersson C, van Engelen BGM, Ottenheijm CAC, Voermans NC, Doorduin J. Neuromuscul Disord. 2022 Aug;32(8):654-663. doi: 10.1016/j.nmd.2022.06.009. Epub 2022 Jun 22. PMID: 35803773
Total fecal IgA levels increase and natural IgM antibodies decrease after gastric bypass surgery.
Istomin N, Härma MA, Akhi R, Nissinen AE, Savolainen MJ, Adeshara K, Lehto M, Groop PH, Koivukangas V, Hukkanen J, Hörkkö S. APMIS. 2022 Nov;130(11):637-646. doi: 10.1111/apm.13268. Epub 2022 Aug 26. PMID: 35959517.
Jansson Sigfrids F, Groop PH, Harjutsalo V.Lancet Diabetes Endocrinol. 2022 Jul;10(7):489-498. doi: 10.1016/S2213-8587(22)00099-7. Epub 2022 Apr 27. PMID: 35489369
Soluble RAGE Prevents Type 1 Diabetes Expanding Functional Regulatory T Cells.
Leung SS, Borg DJ, McCarthy DA, Boursalian TE, Cracraft J, Zhuang A, Fotheringham AK, Flemming N, Watkins T, Miles JJ, Groop PH, Scheijen JL, Schalkwijk CG, Steptoe RJ, Radford KJ, Knip M, Forbes JM. Diabetes. 2022 Sep 1;71(9):1994-2008. doi: 10.2337/db22-0177.PMID: 35713929
Urinary Proteomics Identifies Cathepsin D as a Biomarker of Rapid eGFR Decline in Type 1 Diabetes.
Limonte CP, Valo E, Drel V, Natarajan L, Darshi M, Forsblom C, Henderson CM, Hoofnagle AN, Ju W, Kretzler M, Montemayor D, Nair V, Nelson RG, O'Toole JF, Toto RD, Rosas SE, Ruzinski J, Sandholm N, Schmidt IM, Vaisar T, Waikar SS, Zhang J, Rossing P, Ahluwalia TS, Groop PH, Pennathur S, Snell-Bergeon JK, Costacou T, Orchard TJ, Sharma K, de Boer IH; Kidney Precision Medicine Project. Diabetes Care. 2022 Jun 2;45(6):1416-1427. doi: 10.2337/dc21-2204.PMID: 35377940
Lithovius R, Antikainen AA, Mutter S, Valo E, Forsblom C, Harjutsalo V, Sandholm N, Groop PH. Diabetes Care. 2022 Mar 1;45(3):734-741. doi: 10.2337/dc21-0974. PMID: 35019974
Martinez-Majander N, Gordin D, Joutsi-Korhonen L, Salopuro T, Adeshara K, Sibolt G, Curtze S, Pirinen J, Liebkind R, Soinne L, Sairanen T, Suihko S, Lehto M, Sinisalo J, Groop PH, Tatlisumak T, Putaala J. J Stroke Cerebrovasc Dis. 2022 Sep;31(9):106647. doi: 10.1016/j.jstrokecerebrovasdis.2022.106647. Epub 2022 Jul 15. PMID: 35849915.
Parente EB, Harjutsalo V, Forsblom C,Groop PH. J Clin Endocrinol Metab. 2022 Jan 18;107(2):e653-e662. doi: 10.1210/clinem/dgab671. PMID: 34508598.
Roslund K, Uosukainen M, Järvik K, Hartonen K, Lehto M, Pussinen P, Groop PH, Metsälä M. Sci Rep. 2022 Dec 29;12(1):22534. doi: 10.1038/s41598-022-26497-0. PMID: 36581644.
Sandholm N, Cole JB, Nair V, Sheng X, Liu H, Ahlqvist E, van Zuydam N, Dahlström EH, Fermin D, Smyth LJ, Salem RM, Forsblom C, Valo E, Harjutsalo V, Brennan EP, McKay GJ, Andrews D, Doyle R, Looker HC, Nelson RG, Palmer C, McKnight AJ, Godson C, Maxwell AP, Groop L, McCarthy MI, Kretzler M, Susztak K, Hirschhorn JN, Florez JC, Groop PH; GENIE Consortium.Diabetologia. 2022 Sep;65(9):1495-1509. doi: 10.1007/s00125-022-05735-0. Epub 2022 Jun 28.PMID: 35763030.
Sandholm N, Hotakainen R, Haukka JK, Jansson Sigfrids F, Dahlström EH, Antikainen AA, Valo E, Syreeni A, Kilpeläinen E, Kytölä A, Palotie A, Harjutsalo V, Forsblom C, Groop PH; FinnDiane Study Group. Genome Med. 2022 Nov 23;14(1):132. doi: 10.1186/s13073-022-01135-6. PMID: 36419110.
Smyth LJ, Dahlström EH, Syreeni A, Kerr K, Kilner J, Doyle R, Brennan E, Nair V, Fermin D, Nelson RG, Looker HC, Wooster C, Andrews D, Anderson K, McKay GJ, Cole JB, Salem RM, Conlon PJ, Kretzler M, Hirschhorn JN, Sadlier D, Godson C, Florez JC; GENIE consortium; Forsblom C, Maxwell AP, Groop PH, Sandholm N, McKnight AJ. Nat Commun. 2022 Dec 22;13(1):7891. doi: 10.1038/s41467-022-34963-6.P MID: 36550108.
Telomeres do not always shorten over time in individuals with type 1 diabetes.
Syreeni A, Carroll LM, Mutter S, Januszewski AS, Forsblom C, Lehto M, Groop PH, Jenkins AJ; FinnDiane Study Group. Diabetes Res Clin Pract. 2022 Jun;188:109926. doi: 10.1016/j.diabres.2022.109926. Epub 2022 May 14. PMID: 35580703
Haptoglobin Genotype Does Not Confer a Risk of Stroke in Type 1 Diabetes.
Syreeni A, Dahlström EH, Hägg-Holmberg S, Forsblom C, Eriksson MI, Harjutsalo V, Putaala J, Groop PH, Sandholm N, Thorn LM. Diabetes. 2022 Dec 1;71(12):2728-2738. doi: 10.2337/db22-0327. PMID: 36409784
Tougaard NH, Frimodt-Møller M, Salmenkari H, Stougaard EB, Zawadzki AD, Mattila IM, Hansen TW, Legido-Quigley C, Hörkkö S, Forsblom C, Groop PH, Lehto M, Rossing P. J Clin Med. 2022 Jun 21;11(13):3573. doi: 10.3390/jcm11133573. PMID: 35806857.
Effect of serum sample storage temperature on metabolomic and proteomic biomarkers.
Valo E, Colombo M, Sandholm N, McGurnaghan SJ, Blackbourn LAK, Dunger DB, McKeigue PM, Forsblom C, Groop PH, Colhoun HM, Turner C, Dalton RN. Sci Rep. 2022 Mar 17;12(1):4571. doi: 10.1038/s41598-022-08429-0.PMID: 35301383.
Adeshara KA, Bangar N, Diwan AG, Tupe RS. Diabetes Metab Syndr. 2022 Mar;16(3):102441. doi: 10.1016/j.dsx.2022.102441. Epub 2022 Feb 24. PMID: 35247657
Volatile composition of the morning breath.
Roslund K, Lehto M, Pussinen P, Metsälä M. J Breath Res. 2022 Sep 19;16(4). doi: 10.1088/1752-7163/ac8ec8.PMID: 36055216
Fecal microbiota in congenital chloride diarrhea and inflammatory bowel disease.
Wedenoja S, Saarikivi A, Mälkönen J, Leskinen S, Lehto M, Adeshara K, Tuokkola J, Nikkonen A, Merras-Salmio L, Höyhtyä M, Hörkkö S, Haaramo A, Salonen A, de Vos WM, Korpela K, Kolho KL. PLoS One. 2022 Jun 9;17(6):e0269561. doi: 10.1371/journal.pone.0269561. eCollection 2022. PMID: 35679312
Sandholm N, Rubio García A, Pekalski ML, Inshaw JRJ, Cutler AJ, Todd JA. Sci Rep. 2022 Aug 19;12(1):14137. doi: 10.1038/s41598-022-18296-4. PMID: 35986039.
Islet Gene View-a tool to facilitate islet research.
Asplund O, Storm P, Chandra V, Hatem G, Ottosson-Laakso E, Mansour-Aly D, Krus U, Ibrahim H, Ahlqvist E, Tuomi T, Renström E, Korsgren O, Wierup N, Ibberson M, Solimena M, Marchetti P, Wollheim C, Artner I, Mulder H, Hansson O, Otonkoski T, Groop L, Prasad RB. Life Sci Alliance. 2022 Aug 10;5(12):e202201376. doi: 10.26508/lsa.202201376.
New insights into the genetic etiology of Alzheimer's disease and related dementias.
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Hermann FM, Kjærgaard MF, Tian C, Tiemann U, Jackson A, Olsen LR, Kraft M, Carlsson PO, Elfving IM, Kettunen JLT, Tuomi T, Novak I, Semb H. Cell Stem Cell. 2023 Jan 5;30(1):38-51.e8. doi: 10.1016/j.stem.2022.12.001. Epub 2022 Dec 22
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A saturated map of common genetic variants associated with human height.
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Yamamoto K, Yang J, Yao J, Young H, Yousri NA, Yu L, Zeng L, Zhang W, Zhang X, Zhao JH, Zhao W, Zhou W, Zimmermann ME, Zoledziewska M, Adair LS, Adams HHH, Aguilar-Salinas CA, Al-Mulla F, Arnett DK, Asselbergs FW, Åsvold BO, Attia J, Banas B, Bandinelli S, Bennett DA, Bergler T, Bharadwaj D, Biino G, Bisgaard H, Boerwinkle E, Böger CA, Bønnelykke K, Boomsma DI, Børglum AD, Borja JB, Bouchard C, Bowden DW, Brandslund I, Brumpton B, Buring JE, Caulfield MJ, Chambers JC, Chandak GR, Chanock SJ, Chaturvedi N, Chen YI, Chen Z, Cheng CY, Christophersen IE, Ciullo M, Cole JW, Collins FS, Cooper RS, Cruz M, Cucca F, Cupples LA, Cutler MJ, Damrauer SM, Dantoft TM, de Borst GJ, de Groot LCPGM, De Jager PL, de Kleijn DPV, Janaka de Silva H, Dedoussis GV, den Hollander AI, Du S, Easton DF, Elders PJM, Eliassen AH, Ellinor PT, Elmståhl S, Erdmann J, Evans MK, Fatkin D, Feenstra B, Feitosa MF, Ferrucci L, Ford I, Fornage M, Franke A, Franks PW, Freedman BI, Gasparini P, Gieger C, Girotto G, Goddard 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März W, Matsuda F, McGarrah RW, McGue M, McKnight AJ, Medland SE, Mellström D, Metspalu A, Mitchell BD, Mitchell P, Mook-Kanamori DO, Morris AD, Mucci LA, Munroe PB, Nalls MA, Nazarian S, Nelson AE, Neville MJ, Newton-Cheh C, Nielsen CS, Nöthen MM, Ohlsson C, Oldehinkel AJ, Orozco L, Pahkala K, Pajukanta P, Palmer CNA, Parra EJ, Pattaro C, Pedersen O, Pennell CE, Penninx BWJH, Perusse L, Peters A, Peyser PA, Porteous DJ, Posthuma D, Power C, Pramstaller PP, Province MA, Qi Q, Qu J, Rader DJ, Raitakari OT, Ralhan S, Rallidis LS, Rao DC, Redline S, Reilly DF, Reiner AP, Rhee SY, Ridker PM, Rienstra M, Ripatti S, Ritchie MD, Roden DM, Rosendaal FR, Rotter JI, Rudan I, Rutters F, Sabanayagam C, Saleheen D, Salomaa V, Samani NJ, Sanghera DK, Sattar N, Schmidt B, Schmidt H, Schmidt R, Schulze MB, Schunkert H, Scott LJ, Scott RJ, Sever P, Shiroma EJ, Shoemaker MB, Shu XO, Simonsick EM, Sims M, Singh JR, Singleton AB, Sinner MF, Smith JG, Snieder H, Spector TD, Stampfer MJ, Stark KJ, Strachan 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The Finnish genetic heritage in 2022 - from diagnosis to translational research.
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Idiopathic scoliosis: a systematic review and meta-analysis of heritability.
Cheng T, Einarsdottir E, Kere J, Gerdhem P. EFORT Open Rev. 2022 May 31;7(6):414-421. doi: 10.1530/EOR-22-0026.PMID: 35638601 Free PMC article. Review.
Yoshihara M, Wagner M, Damdimopoulos A, Zhao C, Petropoulos S, Katayama S, Kere J, Lanner F, Damdimopoulou P. Stem Cells. 2022 Dec 6:sxac084. doi: 10.1093/stmcls/sxac084. Online ahead of print.PMID: 36472571.
Costantini A, Mäkitie RE, Hartmann MA, Fratzl-Zelman N, Zillikens MC, Kornak U, Søe K, Mäkitie O.J Bone Miner Res. 2022 Sep;37(9):1623-1641. doi: 10.1002/jbmr.4668. Epub 2022 Sep 11. PMID: 35949115 Review.
High Bone Mass Disorders: New Insights From Connecting the Clinic and the Bench.
Bergen DJM, Maurizi A, Formosa MM, McDonald GLK, El-Gazzar A, Hassan N, Brandi ML, Riancho JA, Rivadeneira F, Ntzani E, Duncan EL, Gregson CL, Kiel DP, Zillikens MC, Sangiorgi L, Högler W, Duran I, Mäkitie O, Van Hul W, Hendrickx G. J Bone Miner Res. 2022 Sep 26. doi: 10.1002/jbmr.4715. Online ahead of print. PMID: 36161343 Review.
Turunen JA, Immonen AT, Kivelä TT. Autoimmun Rev. 2022 Jul;21(7):103054. doi: 10.1016/j.autrev.2022.103054. Epub 2022 Jan 26.
Update on the Corneal Dystrophies-Genetic Testing and Therapy.
Weiss JS, Willoughby CE, Abad-Morales V, Turunen JA, Lisch W. Cornea. 2022 Nov 1;41(11):1337-1344. doi: 10.1097/ICO.0000000000002857. Epub 2022 Jul 4. Review
Use of animal models to understand titin physiology and pathology.
Marcello M, Cetrangolo V, Savarese M, Udd B. J Cell Mol Med. 2022 Oct;26(20):5103-5112. doi: 10.1111/jcmm.17533. Epub 2022 Sep 6. PMID: 36065969 Review
Mutation update for the ACTN2 gene.
Ranta-Aho J, Olive M, Vandroux M, Roticiani G, Dominguez C, Johari M, Torella A, Böhm J, Turon J, Nigro V, Hackman P, Laporte J, Udd B, Savarese M. Hum Mutat. 2022 Dec;43(12):1745-1756. doi: 10.1002/humu.24470. Epub 2022 Sep 27. PMID: 36116040 Review.
Telomeres in clinical diabetes research - Moving towards precision medicine in diabetes care?
Jenkins AJ, Syreeni A, Mutter S, Januszewski AS, Groop PH. Diabetes Res Clin Pract. 2022 Dec;194:110178. doi: 10.1016/j.diabres.2022.110178. Epub 2022 Nov 24. PMID: 36427630
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Exercise and nutrition in type 1 diabetes: Insights from the FinnDiane cohort.
Pongrac Barlovic D, Harjutsalo V, Groop PH. Front Endocrinol (Lausanne). 2022 Dec 22;13:1064185. doi: 10.3389/fendo.2022.1064185. eCollection 2022.PMID: 36619534. Review
Tyypin 1 diabetes ja muut autoimmuunisairaudet.
Mäkimattila S,Harjutsalo V. Duodecim 2021; 137(22): 2419–2425 Review
https://www.duodecimlehti.fi/lehti/2021/22/duo16528?keyword=Harjutsalo
Periodontitis and cardiometabolic disorders: The role of lipopolysaccharide and endotoxemia.
Pussinen PJ, Kopra E, Pietiäinen M, Lehto M, Zaric S, Paju S, Salminen A. Periodontol 2000. 2022 Jun;89(1):19-40. doi: 10.1111/prd.12433. Epub 2022 Mar 4. PMID: 35244966. Review
Clinical Use of Insulin Glargine 300 U/mL in Adults with Type 2 Diabetes: Hypothetical Case Studies.
Harris SB, Parente EB, Karalliedde J. Diabetes Ther. 2022 May;13(5):913-930. doi: 10.1007/s13300-022-01247-7. Epub 2022 Mar 30. PMID: 35355207. Review